FROM:
http://www.doxpara.com/md5_someday.pdf
In addition, being limited to the MD5 initial state means only hashes calculated on a per-file basis can be made to collide; a full disc or partition sum will come across the doppelganger set at a vastly different initial state and fail to collide. With the full attack we could specify our colliding blocks against the MD5 state that would be found during a full disk or partition hashing operation. Of course, then the colliding set we generated wouldn t collide on a per-file basis. Thus far we can only adapt to a single MD5 state at a time.